Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpne3Q8BT60 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Gm8318-201ENSMUST00000182954 872 ntBASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.51□□□□□ -0.09
Cpne3Q8BT60 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpne3Q8BT60 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm27646-201ENSMUST00000183989 110 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm21362-201ENSMUST00000194272 928 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm6296-201ENSMUST00000222599 943 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpne3Q8BT60 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cpne3Q8BT60 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms