Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.11■□□□□ 0.33
Scfd1Q8BRF7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Gm29541-201ENSMUST00000191351 678 ntBASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.1■□□□□ 0.33
Scfd1Q8BRF7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm5479-201ENSMUST00000160578 435 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scfd1Q8BRF7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scfd1Q8BRF7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm27618-201ENSMUST00000183671 60 ntBASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scfd1Q8BRF7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.07■□□□□ 0.32
Scfd1Q8BRF7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms