Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nhlrc1Q8BR37 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Gm10576-201ENSMUST00000191927 825 ntBASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.67□□□□□ -0.54
Nhlrc1Q8BR37 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Rprl2-201ENSMUST00000157150 290 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm5312-201ENSMUST00000203728 547 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nhlrc1Q8BR37 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nhlrc1Q8BR37 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms