Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip4Q8BQP8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rab11fip4Q8BQP8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip4Q8BQP8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab11fip4Q8BQP8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Efs-202ENSMUST00000227037 2540 ntBASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Gm23935-201ENSMUST00000102303 57 ntBASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Gm24270-201ENSMUST00000102326 57 ntBASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Gm24245-201ENSMUST00000157318 57 ntBASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab11fip4Q8BQP8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rab11fip4Q8BQP8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rab11fip4Q8BQP8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rab11fip4Q8BQP8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rab11fip4Q8BQP8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rab11fip4Q8BQP8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab11fip4Q8BQP8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rab11fip4Q8BQP8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rab11fip4Q8BQP8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms