Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ckap4Q8BMK4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ckap4Q8BMK4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ckap4Q8BMK4 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Gm8344-201ENSMUST00000119813 856 ntBASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.22□□□□□ -0.13
Ckap4Q8BMK4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms