Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf18Q8BM39 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf18Q8BM39 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Rubie-203ENSMUST00000227803 2430 ntBASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf18Q8BM39 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Gm13312-201ENSMUST00000119631 718 ntBASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Rprl3-201ENSMUST00000157400 290 ntBASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Gm7367-201ENSMUST00000057611 492 ntBASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf18Q8BM39 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf18Q8BM39 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms