Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Gm11764-201ENSMUST00000120221 623 ntBASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Depdc1bQ8BH88 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Depdc1bQ8BH88 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Depdc1bQ8BH88 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Depdc1bQ8BH88 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Gm14494-201ENSMUST00000118786 435 ntBASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Depdc1bQ8BH88 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms