Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trim65Q8BFW4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Gm44771-201ENSMUST00000206975 626 ntBASIC16.09■□□□□ 0.17
Trim65Q8BFW4 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.09■□□□□ 0.17
Trim65Q8BFW4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim65Q8BFW4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trim65Q8BFW4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.08■□□□□ 0.16
Trim65Q8BFW4 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim65Q8BFW4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim65Q8BFW4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim65Q8BFW4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim65Q8BFW4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim65Q8BFW4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.06■□□□□ 0.16
Trim65Q8BFW4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim65Q8BFW4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms