Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
Trnp1Q80ZI1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Gm13464-201ENSMUST00000119418 935 ntBASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Gm9002-201ENSMUST00000178437 499 ntBASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnp1Q80ZI1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 AY702102-202ENSMUST00000194651 1173 ntBASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Gm6007-201ENSMUST00000208170 823 ntBASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Gm19220-201ENSMUST00000222682 803 ntBASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnp1Q80ZI1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnp1Q80ZI1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms