Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Gm10175-202ENSMUST00000208752 441 ntBASIC12.71□□□□□ -0.37
Upk3bQ80YF6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Upk3bQ80YF6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.71□□□□□ -0.38
Upk3bQ80YF6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bQ80YF6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bQ80YF6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3bQ80YF6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Upk3bQ80YF6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk3bQ80YF6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm8655-201ENSMUST00000221159 852 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.69□□□□□ -0.38
Upk3bQ80YF6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Gm15358-201ENSMUST00000119249 520 ntBASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Olfr129-201ENSMUST00000122318 993 ntBASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Gm10252-201ENSMUST00000209541 832 ntBASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3bQ80YF6 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms