Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf40bQ80W14 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf40bQ80W14 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Grk6-207ENSMUST00000225925 2769 ntBASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Gm2423-201ENSMUST00000074863 733 ntBASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf40bQ80W14 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf40bQ80W14 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf40bQ80W14 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Gm5779-201ENSMUST00000218467 910 ntBASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf40bQ80W14 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms