Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Mir6990-201ENSMUST00000183724 91 ntBASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Gm5312-201ENSMUST00000203728 547 ntBASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh19Q80TF3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh19Q80TF3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh19Q80TF3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm15920-201ENSMUST00000118998 402 ntBASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm11543-201ENSMUST00000120758 370 ntBASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm43125-201ENSMUST00000201724 730 ntBASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gm20553-201ENSMUST00000204205 844 ntBASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh19Q80TF3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh19Q80TF3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms