Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf38bQ80SY5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Prpf38bQ80SY5 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm45747-201ENSMUST00000212203 999 ntBASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.68■□□□□ 0.1
Prpf38bQ80SY5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.67■□□□□ 0.1
Prpf38bQ80SY5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms