Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfx4Q7TNK1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx4Q7TNK1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gm13312-201ENSMUST00000119631 718 ntBASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx4Q7TNK1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx4Q7TNK1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms