Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Vma21Q78T54 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vma21Q78T54 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Vma21Q78T54 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Vma21Q78T54 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.24□□□□□ -0.45
Vma21Q78T54 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.24□□□□□ -0.45
Vma21Q78T54 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Vma21Q78T54 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.24□□□□□ -0.45
Vma21Q78T54 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.24□□□□□ -0.45
Vma21Q78T54 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vma21Q78T54 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vma21Q78T54 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gm15358-201ENSMUST00000119249 520 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gm7284-201ENSMUST00000131667 944 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gm8318-201ENSMUST00000182954 872 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.23□□□□□ -0.45
Vma21Q78T54 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vma21Q78T54 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vma21Q78T54 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.22□□□□□ -0.45
Vma21Q78T54 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Vma21Q78T54 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm8097-201ENSMUST00000117903 829 ntBASIC12.22□□□□□ -0.45
Vma21Q78T54 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vma21Q78T54 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms