Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm45384-201ENSMUST00000210451 277 ntBASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx55Q6ZPL9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Gm9522-201ENSMUST00000182394 926 ntBASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Gm45668-201ENSMUST00000211271 493 ntBASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Gm25857-201ENSMUST00000082788 129 ntBASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx55Q6ZPL9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Gm13464-201ENSMUST00000119418 935 ntBASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Gm9908-201ENSMUST00000211534 448 ntBASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx55Q6ZPL9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms