Protein–RNA interactions for Protein: Q6ZPJ3

Ube2o, (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2oQ6ZPJ3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube2oQ6ZPJ3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube2oQ6ZPJ3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ube2oQ6ZPJ3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube2oQ6ZPJ3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube2oQ6ZPJ3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube2oQ6ZPJ3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm22175-201ENSMUST00000175007 78 ntBASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm7774-201ENSMUST00000200064 533 ntBASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube2oQ6ZPJ3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube2oQ6ZPJ3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube2oQ6ZPJ3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube2oQ6ZPJ3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms