Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npc1l1Q6T3U4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npc1l1Q6T3U4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Gm6973-201ENSMUST00000117080 721 ntBASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Npc1l1Q6T3U4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npc1l1Q6T3U4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npc1l1Q6T3U4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms