Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShbQ6PD21 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ShbQ6PD21 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ShbQ6PD21 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ShbQ6PD21 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.02■□□□□ 0.16
ShbQ6PD21 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.02■□□□□ 0.16
ShbQ6PD21 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.02■□□□□ 0.16
ShbQ6PD21 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.02■□□□□ 0.16
ShbQ6PD21 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.02■□□□□ 0.16
ShbQ6PD21 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.02■□□□□ 0.16
ShbQ6PD21 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ShbQ6PD21 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
ShbQ6PD21 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.02■□□□□ 0.15
ShbQ6PD21 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.15
ShbQ6PD21 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.02■□□□□ 0.15
ShbQ6PD21 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ShbQ6PD21 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.01■□□□□ 0.15
ShbQ6PD21 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Gm43179-201ENSMUST00000198797 275 ntBASIC16.01■□□□□ 0.15
ShbQ6PD21 Olfr286-202ENSMUST00000205305 969 ntBASIC16.01■□□□□ 0.15
ShbQ6PD21 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.01■□□□□ 0.15
ShbQ6PD21 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ShbQ6PD21 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
ShbQ6PD21 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ShbQ6PD21 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Trav13-3-201ENSMUST00000117226 336 ntBASIC16■□□□□ 0.15
ShbQ6PD21 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16■□□□□ 0.15
ShbQ6PD21 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ShbQ6PD21 Mir3102-201ENSMUST00000175555 104 ntBASIC16■□□□□ 0.15
ShbQ6PD21 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 AC153872.1-201ENSMUST00000199539 128 ntBASIC16■□□□□ 0.15
ShbQ6PD21 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16■□□□□ 0.15
ShbQ6PD21 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Mxra8os-201ENSMUST00000097740 687 ntBASIC16■□□□□ 0.15
ShbQ6PD21 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ShbQ6PD21 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms