Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Gm7284-201ENSMUST00000131667 944 ntBASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcd3Q6P9Z1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Gm21362-201ENSMUST00000194272 928 ntBASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcd3Q6P9Z1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Gm27357-201ENSMUST00000183754 135 ntBASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcd3Q6P9Z1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Smarcd3Q6P9Z1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcd3Q6P9Z1 Gm14859-201ENSMUST00000117752 357 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms