Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Gm12008-201ENSMUST00000117791 755 ntBASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Mzt1-203ENSMUST00000227948 952 ntBASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hdac4Q6NZM9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Gm7461-201ENSMUST00000058918 827 ntBASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hdac4Q6NZM9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.77■□□□□ 0.28
Hdac4Q6NZM9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hdac4Q6NZM9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hdac4Q6NZM9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hdac4Q6NZM9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms