Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.57□□□□□ -0.08
Cpsf6Q6NVF9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf6Q6NVF9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf6Q6NVF9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf6Q6NVF9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf6Q6NVF9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms