Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Gm18489-201ENSMUST00000172565 551 ntBASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Mir5126-201ENSMUST00000175513 77 ntBASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ParpbpQ6IRT3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Gm13036-201ENSMUST00000117799 748 ntBASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
ParpbpQ6IRT3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ParpbpQ6IRT3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.08□□□□□ -0.15
ParpbpQ6IRT3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ParpbpQ6IRT3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ParpbpQ6IRT3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ParpbpQ6IRT3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ParpbpQ6IRT3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms