Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.45□□□□□ -0.1
Sdc3Q64519 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.45□□□□□ -0.1
Sdc3Q64519 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Gm6736-201ENSMUST00000166583 948 ntBASIC14.45□□□□□ -0.1
Sdc3Q64519 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sdc3Q64519 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Gm44492-201ENSMUST00000197012 141 ntBASIC14.45□□□□□ -0.1
Sdc3Q64519 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.45□□□□□ -0.1
Sdc3Q64519 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Sdc3Q64519 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.45□□□□□ -0.1
Sdc3Q64519 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sdc3Q64519 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Sdc3Q64519 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.44□□□□□ -0.1
Sdc3Q64519 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm17271-201ENSMUST00000165535 355 ntBASIC14.44□□□□□ -0.1
Sdc3Q64519 Mir8117-201ENSMUST00000184773 107 ntBASIC14.44□□□□□ -0.1
Sdc3Q64519 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sdc3Q64519 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sdc3Q64519 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sdc3Q64519 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.43□□□□□ -0.1
Sdc3Q64519 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.43□□□□□ -0.1
Sdc3Q64519 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.43□□□□□ -0.1
Sdc3Q64519 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.43□□□□□ -0.1
Sdc3Q64519 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.43□□□□□ -0.1
Sdc3Q64519 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sdc3Q64519 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc3Q64519 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.42□□□□□ -0.1
Sdc3Q64519 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sdc3Q64519 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc3Q64519 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms