Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Mir7070-201ENSMUST00000183657 86 ntBASIC13.99□□□□□ -0.17
AtmQ62388 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AtmQ62388 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Gm27701-201ENSMUST00000184498 110 ntBASIC13.99□□□□□ -0.17
AtmQ62388 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.99□□□□□ -0.17
AtmQ62388 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AtmQ62388 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AtmQ62388 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.99□□□□□ -0.17
AtmQ62388 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AtmQ62388 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.99□□□□□ -0.17
AtmQ62388 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.99□□□□□ -0.17
AtmQ62388 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.99□□□□□ -0.17
AtmQ62388 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AtmQ62388 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
AtmQ62388 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AtmQ62388 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.98□□□□□ -0.17
AtmQ62388 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
AtmQ62388 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.98□□□□□ -0.17
AtmQ62388 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.98□□□□□ -0.17
AtmQ62388 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AtmQ62388 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Snora78-201ENSMUST00000158630 128 ntBASIC13.97□□□□□ -0.17
AtmQ62388 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
AtmQ62388 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AtmQ62388 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
AtmQ62388 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.97□□□□□ -0.17
AtmQ62388 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.97□□□□□ -0.17
AtmQ62388 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.97□□□□□ -0.17
AtmQ62388 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.97□□□□□ -0.17
AtmQ62388 Gm19220-201ENSMUST00000222682 803 ntBASIC13.97□□□□□ -0.17
AtmQ62388 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
AtmQ62388 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.97□□□□□ -0.17
AtmQ62388 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.97□□□□□ -0.17
AtmQ62388 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AtmQ62388 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms