Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.42■□□□□ 0.38
Scn9aQ62205 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Gm4984-201ENSMUST00000115987 360 ntBASIC17.42■□□□□ 0.38
Scn9aQ62205 Mir1894-201ENSMUST00000122802 81 ntBASIC17.42■□□□□ 0.38
Scn9aQ62205 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn9aQ62205 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn9aQ62205 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.42■□□□□ 0.38
Scn9aQ62205 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn9aQ62205 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Scn9aQ62205 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Gm12390-201ENSMUST00000117897 397 ntBASIC17.42■□□□□ 0.38
Scn9aQ62205 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn9aQ62205 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn9aQ62205 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn9aQ62205 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn9aQ62205 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Gm12341-201ENSMUST00000119724 503 ntBASIC17.41■□□□□ 0.38
Scn9aQ62205 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Scn9aQ62205 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Scn9aQ62205 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn9aQ62205 Gm5354-201ENSMUST00000182417 973 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 Olfr286-202ENSMUST00000205305 969 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Gm12957-201ENSMUST00000117835 377 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 Mir1982-201ENSMUST00000157368 74 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn9aQ62205 Gm5356-201ENSMUST00000093326 615 ntBASIC17.4■□□□□ 0.38
Scn9aQ62205 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn9aQ62205 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn9aQ62205 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Scn9aQ62205 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn9aQ62205 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.39■□□□□ 0.37
Scn9aQ62205 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn9aQ62205 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.39■□□□□ 0.37
Scn9aQ62205 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn9aQ62205 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.38■□□□□ 0.37
Scn9aQ62205 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scn9aQ62205 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn9aQ62205 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn9aQ62205 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Scn9aQ62205 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.38■□□□□ 0.37
Scn9aQ62205 Gm13392-201ENSMUST00000117708 150 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms