Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.44□□□□□ -0.42
Phox2aQ62066 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Phox2aQ62066 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.44□□□□□ -0.42
Phox2aQ62066 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Phox2aQ62066 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Phox2aQ62066 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Phox2aQ62066 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Phox2aQ62066 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Gm11539-201ENSMUST00000119837 557 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Gm13436-201ENSMUST00000120418 567 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Acot6-202ENSMUST00000222921 3622 ntBASIC12.43□□□□□ -0.42
Phox2aQ62066 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phox2aQ62066 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phox2aQ62066 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gm13559-201ENSMUST00000120476 863 ntBASIC12.42□□□□□ -0.42
Phox2aQ62066 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gm10252-201ENSMUST00000209541 832 ntBASIC12.42□□□□□ -0.42
Phox2aQ62066 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Phox2aQ62066 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phox2aQ62066 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.41□□□□□ -0.42
Phox2aQ62066 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phox2aQ62066 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.41□□□□□ -0.42
Phox2aQ62066 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms