Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.91□□□□□ -0.18
VcanQ62059 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
VcanQ62059 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.91□□□□□ -0.18
VcanQ62059 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
VcanQ62059 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VcanQ62059 Gm29199-201ENSMUST00000187766 775 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Gm37259-201ENSMUST00000193903 849 ntBASIC13.91□□□□□ -0.18
VcanQ62059 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.91□□□□□ -0.18
VcanQ62059 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.9□□□□□ -0.18
VcanQ62059 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.9□□□□□ -0.18
VcanQ62059 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.9□□□□□ -0.18
VcanQ62059 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.9□□□□□ -0.18
VcanQ62059 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.9□□□□□ -0.18
VcanQ62059 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.9□□□□□ -0.18
VcanQ62059 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Gm46209-201ENSMUST00000217912 553 ntBASIC13.9□□□□□ -0.18
VcanQ62059 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VcanQ62059 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VcanQ62059 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
VcanQ62059 Gm22018-201ENSMUST00000104357 131 ntBASIC13.89□□□□□ -0.19
VcanQ62059 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.89□□□□□ -0.19
VcanQ62059 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.89□□□□□ -0.19
VcanQ62059 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VcanQ62059 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Gm27516-201ENSMUST00000184237 98 ntBASIC13.89□□□□□ -0.19
VcanQ62059 Gm18054-201ENSMUST00000207539 555 ntBASIC13.89□□□□□ -0.19
VcanQ62059 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VcanQ62059 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VcanQ62059 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.89□□□□□ -0.19
VcanQ62059 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
VcanQ62059 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VcanQ62059 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.88□□□□□ -0.19
VcanQ62059 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.88□□□□□ -0.19
VcanQ62059 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
VcanQ62059 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.88□□□□□ -0.19
VcanQ62059 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.88□□□□□ -0.19
VcanQ62059 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VcanQ62059 Gm3961-201ENSMUST00000204425 994 ntBASIC13.88□□□□□ -0.19
VcanQ62059 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Gm6091-201ENSMUST00000098307 165 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VcanQ62059 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.88□□□□□ -0.19
VcanQ62059 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 Gm8318-201ENSMUST00000182954 872 ntBASIC13.88□□□□□ -0.19
VcanQ62059 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VcanQ62059 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcanQ62059 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.87□□□□□ -0.19
VcanQ62059 Gm16476-201ENSMUST00000221544 139 ntBASIC13.87□□□□□ -0.19
VcanQ62059 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.87□□□□□ -0.19
VcanQ62059 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms