Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.53■□□□□ 0.24
Ecm1Q61508 Gm7653-201ENSMUST00000214567 508 ntBASIC16.53■□□□□ 0.24
Ecm1Q61508 Gm46209-201ENSMUST00000217912 553 ntBASIC16.53■□□□□ 0.24
Ecm1Q61508 Dupd1-202ENSMUST00000224735 548 ntBASIC16.53■□□□□ 0.24
Ecm1Q61508 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Asic1-205ENSMUST00000228185 1818 ntBASIC16.53■□□□□ 0.24
Ecm1Q61508 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Ecm1Q61508 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ecm1Q61508 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ecm1Q61508 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ecm1Q61508 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm12859-201ENSMUST00000117834 427 ntBASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm4875-201ENSMUST00000118257 786 ntBASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm6222-201ENSMUST00000120787 396 ntBASIC16.52■□□□□ 0.24
Ecm1Q61508 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm9794-201ENSMUST00000202370 423 ntBASIC16.52■□□□□ 0.24
Ecm1Q61508 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Gm6218-201ENSMUST00000219812 628 ntBASIC16.52■□□□□ 0.24
Ecm1Q61508 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.52■□□□□ 0.24
Ecm1Q61508 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.52■□□□□ 0.24
Ecm1Q61508 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ecm1Q61508 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ecm1Q61508 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ecm1Q61508 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ecm1Q61508 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ecm1Q61508 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ecm1Q61508 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ecm1Q61508 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Gm27631-201ENSMUST00000184163 466 ntBASIC16.51■□□□□ 0.23
Ecm1Q61508 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.51■□□□□ 0.23
Ecm1Q61508 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ecm1Q61508 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ecm1Q61508 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ecm1Q61508 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Gm12490-201ENSMUST00000120255 560 ntBASIC16.5■□□□□ 0.23
Ecm1Q61508 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.5■□□□□ 0.23
Ecm1Q61508 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.5■□□□□ 0.23
Ecm1Q61508 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ecm1Q61508 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms