Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.64■□□□□ 0.25
Ift88Q61371 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.64■□□□□ 0.25
Ift88Q61371 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ift88Q61371 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.64■□□□□ 0.25
Ift88Q61371 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ift88Q61371 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ift88Q61371 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ift88Q61371 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ift88Q61371 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ift88Q61371 Gm10499-201ENSMUST00000174094 934 ntBASIC16.63■□□□□ 0.25
Ift88Q61371 Gm27646-201ENSMUST00000183989 110 ntBASIC16.63■□□□□ 0.25
Ift88Q61371 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.63■□□□□ 0.25
Ift88Q61371 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ift88Q61371 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ift88Q61371 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ift88Q61371 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ift88Q61371 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ift88Q61371 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm6296-201ENSMUST00000222599 943 ntBASIC16.62■□□□□ 0.25
Ift88Q61371 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ift88Q61371 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ift88Q61371 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.62■□□□□ 0.25
Ift88Q61371 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ift88Q61371 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ift88Q61371 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.61■□□□□ 0.25
Ift88Q61371 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ift88Q61371 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ift88Q61371 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.61■□□□□ 0.25
Ift88Q61371 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.61■□□□□ 0.25
Ift88Q61371 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ift88Q61371 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ift88Q61371 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms