Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.54■□□□□ 0.24
Col11a1Q61245 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm9182-201ENSMUST00000217829 639 ntBASIC16.54■□□□□ 0.24
Col11a1Q61245 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a1Q61245 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.54■□□□□ 0.24
Col11a1Q61245 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col11a1Q61245 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col11a1Q61245 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col11a1Q61245 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col11a1Q61245 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Col11a1Q61245 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.53■□□□□ 0.24
Col11a1Q61245 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.53■□□□□ 0.24
Col11a1Q61245 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.53■□□□□ 0.24
Col11a1Q61245 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a1Q61245 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Col11a1Q61245 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm15198-201ENSMUST00000117283 177 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm10275-202ENSMUST00000168697 495 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.52■□□□□ 0.24
Col11a1Q61245 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm10275-201ENSMUST00000092620 635 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.52■□□□□ 0.24
Col11a1Q61245 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a1Q61245 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.52■□□□□ 0.24
Col11a1Q61245 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.52■□□□□ 0.23
Col11a1Q61245 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.52■□□□□ 0.23
Col11a1Q61245 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col11a1Q61245 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.52■□□□□ 0.23
Col11a1Q61245 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.52■□□□□ 0.23
Col11a1Q61245 Gm42693-201ENSMUST00000196779 631 ntBASIC16.52■□□□□ 0.23
Col11a1Q61245 Gm18307-201ENSMUST00000206864 949 ntBASIC16.52■□□□□ 0.23
Col11a1Q61245 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a1Q61245 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Gm23931-201ENSMUST00000103842 109 ntBASIC16.51■□□□□ 0.23
Col11a1Q61245 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.51■□□□□ 0.23
Col11a1Q61245 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.51■□□□□ 0.23
Col11a1Q61245 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.51■□□□□ 0.23
Col11a1Q61245 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.51■□□□□ 0.23
Col11a1Q61245 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col11a1Q61245 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a1Q61245 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms