Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shroom1Q5SX79 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Gm9385-201ENSMUST00000117563 472 ntBASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.97■□□□□ 0.15
Shroom1Q5SX79 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Shroom1Q5SX79 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Gm43125-201ENSMUST00000201724 730 ntBASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Shroom1Q5SX79 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shroom1Q5SX79 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.96■□□□□ 0.14
Shroom1Q5SX79 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shroom1Q5SX79 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Gm18057-201ENSMUST00000208220 503 ntBASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.95■□□□□ 0.14
Shroom1Q5SX79 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms