Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3-1Q5R1I8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-1Q5R1I8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Gm12008-201ENSMUST00000117791 755 ntBASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Gm27801-201ENSMUST00000184174 223 ntBASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-1Q5R1I8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms