Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm6623-201ENSMUST00000173570 544 ntBASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav15-1-dv6-1Q5R1D2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms