Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-3Q5R1C3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3-3Q5R1C3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.27□□□□□ -0.6
Trav3-3Q5R1C3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.27□□□□□ -0.61
Trav3-3Q5R1C3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms