Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trav8d-2Q5R1B6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Gm13829-201ENSMUST00000119600 138 ntBASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Gm45098-201ENSMUST00000207179 657 ntBASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav8d-2Q5R1B6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Gm27631-201ENSMUST00000184163 466 ntBASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Gm9229-201ENSMUST00000222777 126 ntBASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav8d-2Q5R1B6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav8d-2Q5R1B6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Gm11918-201ENSMUST00000121660 179 ntBASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav8d-2Q5R1B6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms