Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm1Q52KI8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm14722-201ENSMUST00000118943 689 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm15321-201ENSMUST00000121290 288 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm12138-201ENSMUST00000122180 951 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm27838-201ENSMUST00000184829 128 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm43433-201ENSMUST00000196573 481 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Gm25857-201ENSMUST00000082788 129 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm1Q52KI8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Gm6745-201ENSMUST00000199216 526 ntBASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm1Q52KI8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Srrm1Q52KI8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm1Q52KI8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm1Q52KI8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms