Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf223Q3UV31 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Asic1-205ENSMUST00000228185 1818 ntBASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Gm11543-201ENSMUST00000120758 370 ntBASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf223Q3UV31 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf223Q3UV31 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Gm2810-201ENSMUST00000118681 990 ntBASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Gm43930-201ENSMUST00000203868 845 ntBASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf223Q3UV31 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm22065-201ENSMUST00000103753 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm22066-201ENSMUST00000103761 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm24932-201ENSMUST00000103763 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm24115-201ENSMUST00000103799 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm22190-201ENSMUST00000103827 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm22191-201ENSMUST00000103831 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm25287-201ENSMUST00000103846 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm24721-201ENSMUST00000103849 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm22918-201ENSMUST00000103855 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm28018-201ENSMUST00000103869 110 ntBASIC14.51□□□□□ -0.09
Rnf223Q3UV31 Gm26399-201ENSMUST00000103937 110 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms