Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdkl5Q3UTQ8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdkl5Q3UTQ8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cdkl5Q3UTQ8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Gm7461-201ENSMUST00000058918 827 ntBASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdkl5Q3UTQ8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Gm27300-201ENSMUST00000184085 97 ntBASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Gm27335-201ENSMUST00000184758 97 ntBASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl5Q3UTQ8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl5Q3UTQ8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms