Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.46□□□□□ -0.41
Znf48Q3US17 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.46□□□□□ -0.41
Znf48Q3US17 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.46□□□□□ -0.41
Znf48Q3US17 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.46□□□□□ -0.41
Znf48Q3US17 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.46□□□□□ -0.41
Znf48Q3US17 Gm8655-201ENSMUST00000221159 852 ntBASIC12.46□□□□□ -0.41
Znf48Q3US17 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Znf48Q3US17 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.46□□□□□ -0.42
Znf48Q3US17 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.46□□□□□ -0.42
Znf48Q3US17 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Znf48Q3US17 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Znf48Q3US17 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Gm14701-201ENSMUST00000117156 348 ntBASIC12.45□□□□□ -0.42
Znf48Q3US17 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Chchd1-203ENSMUST00000224633 557 ntBASIC12.45□□□□□ -0.42
Znf48Q3US17 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.45□□□□□ -0.42
Znf48Q3US17 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.45□□□□□ -0.42
Znf48Q3US17 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Znf48Q3US17 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Mir8117-201ENSMUST00000184773 107 ntBASIC12.44□□□□□ -0.42
Znf48Q3US17 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.44□□□□□ -0.42
Znf48Q3US17 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Znf48Q3US17 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms