Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shisa3Q3UPR0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shisa3Q3UPR0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.96□□□□□ -0.33
Shisa3Q3UPR0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Shisa3Q3UPR0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa3Q3UPR0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms