Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cks1brtQ3UNC9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gm7638-201ENSMUST00000121348 967 ntBASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cks1brtQ3UNC9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cks1brtQ3UNC9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 AV356131-201ENSMUST00000206201 750 ntBASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cks1brtQ3UNC9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms