Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Spg11Q3UHA3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Gm11814-201ENSMUST00000119515 929 ntBASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Spg11Q3UHA3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Spg11Q3UHA3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Gm44364-201ENSMUST00000198368 141 ntBASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Gm40466-201ENSMUST00000212174 422 ntBASIC13.69□□□□□ -0.22
Spg11Q3UHA3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Spg11Q3UHA3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms