Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Brf2Q3UAW9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.14□□□□□ -0.15
Brf2Q3UAW9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm10060-201ENSMUST00000212002 111 ntBASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Brf2Q3UAW9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Brf2Q3UAW9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms