Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Q3KNL4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Q3KNL4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Q3KNL4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Q3KNL4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.78□□□□□ -0.04
Q3KNL4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Q3KNL4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.77□□□□□ -0.04
Q3KNL4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.77□□□□□ -0.04
Q3KNL4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Q3KNL4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Q3KNL4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.77□□□□□ -0.04
Q3KNL4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Q3KNL4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.77□□□□□ -0.05
Q3KNL4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Gm8318-201ENSMUST00000182954 872 ntBASIC14.77□□□□□ -0.05
Q3KNL4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.77□□□□□ -0.05
Q3KNL4 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.77□□□□□ -0.05
Q3KNL4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.77□□□□□ -0.05
Q3KNL4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Q3KNL4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Q3KNL4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.76□□□□□ -0.05
Q3KNL4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.76□□□□□ -0.05
Q3KNL4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Q3KNL4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.76□□□□□ -0.05
Q3KNL4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.76□□□□□ -0.05
Q3KNL4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.76□□□□□ -0.05
Q3KNL4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.76□□□□□ -0.05
Q3KNL4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.76□□□□□ -0.05
Q3KNL4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Q3KNL4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Q3KNL4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Q3KNL4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Q3KNL4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.75□□□□□ -0.05
Q3KNL4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.75□□□□□ -0.05
Q3KNL4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Q3KNL4 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.75□□□□□ -0.05
Q3KNL4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.74□□□□□ -0.05
Q3KNL4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Q3KNL4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Q3KNL4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Q3KNL4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Q3KNL4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Q3KNL4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms