Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm29541-201ENSMUST00000191351 678 ntBASIC14.38□□□□□ -0.11
Hoxc4Q08624 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.38□□□□□ -0.11
Hoxc4Q08624 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.37□□□□□ -0.11
Hoxc4Q08624 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Mir7023-201ENSMUST00000185093 64 ntBASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gm45098-201ENSMUST00000207179 657 ntBASIC14.37□□□□□ -0.11
Hoxc4Q08624 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.37□□□□□ -0.11
Hoxc4Q08624 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc4Q08624 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.36□□□□□ -0.11
Hoxc4Q08624 Gm2451-201ENSMUST00000199447 999 ntBASIC14.36□□□□□ -0.11
Hoxc4Q08624 Gm10290-201ENSMUST00000200451 999 ntBASIC14.36□□□□□ -0.11
Hoxc4Q08624 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc4Q08624 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm25144-201ENSMUST00000179561 110 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm25352-201ENSMUST00000179815 110 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc4Q08624 Gm18766-201ENSMUST00000189811 808 ntBASIC14.35□□□□□ -0.11
Hoxc4Q08624 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms