Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm6296-201ENSMUST00000222599 943 ntBASIC12.49□□□□□ -0.41
Tff1Q08423 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Tff1Q08423 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.49□□□□□ -0.41
Tff1Q08423 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Tff1Q08423 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tff1Q08423 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.48□□□□□ -0.41
Tff1Q08423 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.48□□□□□ -0.41
Tff1Q08423 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tff1Q08423 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.48□□□□□ -0.41
Tff1Q08423 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.48□□□□□ -0.41
Tff1Q08423 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.48□□□□□ -0.41
Tff1Q08423 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.48□□□□□ -0.41
Tff1Q08423 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.48□□□□□ -0.41
Tff1Q08423 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.48□□□□□ -0.41
Tff1Q08423 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.48□□□□□ -0.41
Tff1Q08423 Gm5364-201ENSMUST00000216789 889 ntBASIC12.48□□□□□ -0.41
Tff1Q08423 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Tff1Q08423 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tff1Q08423 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tff1Q08423 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tff1Q08423 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Gm10060-201ENSMUST00000212002 111 ntBASIC12.47□□□□□ -0.41
Tff1Q08423 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tff1Q08423 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tff1Q08423 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tff1Q08423 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.46□□□□□ -0.41
Tff1Q08423 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.46□□□□□ -0.41
Tff1Q08423 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tff1Q08423 Gm15165-201ENSMUST00000118140 502 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms