Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.62□□□□□ -0.55
Cdx4Q07424 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm11780-201ENSMUST00000136880 516 ntBASIC11.62□□□□□ -0.55
Cdx4Q07424 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm37935-201ENSMUST00000192012 982 ntBASIC11.62□□□□□ -0.55
Cdx4Q07424 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdx4Q07424 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx4Q07424 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.61□□□□□ -0.55
Cdx4Q07424 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdx4Q07424 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx4Q07424 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Cdx4Q07424 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cdx4Q07424 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Cdx4Q07424 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdx4Q07424 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cdx4Q07424 Gm14722-201ENSMUST00000118943 689 ntBASIC11.6□□□□□ -0.55
Cdx4Q07424 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx4Q07424 Gm12260-201ENSMUST00000122447 411 ntBASIC11.6□□□□□ -0.55
Cdx4Q07424 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.6□□□□□ -0.55
Cdx4Q07424 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms