Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thbs3Q05895 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thbs3Q05895 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thbs3Q05895 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thbs3Q05895 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.19□□□□□ -0.3
Thbs3Q05895 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thbs3Q05895 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Thbs3Q05895 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Thbs3Q05895 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.18□□□□□ -0.3
Thbs3Q05895 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Thbs3Q05895 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thbs3Q05895 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.17□□□□□ -0.3
Thbs3Q05895 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.17□□□□□ -0.3
Thbs3Q05895 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.17□□□□□ -0.3
Thbs3Q05895 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.17□□□□□ -0.3
Thbs3Q05895 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.17□□□□□ -0.3
Thbs3Q05895 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thbs3Q05895 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.17□□□□□ -0.3
Thbs3Q05895 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thbs3Q05895 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Thbs3Q05895 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Thbs3Q05895 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.16□□□□□ -0.3
Thbs3Q05895 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.16□□□□□ -0.3
Thbs3Q05895 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Thbs3Q05895 Gm44771-201ENSMUST00000206975 626 ntBASIC13.16□□□□□ -0.3
Thbs3Q05895 Gm5364-201ENSMUST00000216789 889 ntBASIC13.16□□□□□ -0.3
Thbs3Q05895 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.16□□□□□ -0.3
Thbs3Q05895 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs3Q05895 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms