Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh6P97326 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh6P97326 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh6P97326 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh6P97326 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh6P97326 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Cdh6P97326 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cdh6P97326 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Cdh6P97326 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdh6P97326 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh6P97326 AW822252-206ENSMUST00000208904 237 ntBASIC15.21■□□□□ 0.03
Cdh6P97326 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh6P97326 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh6P97326 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.21■□□□□ 0.03
Cdh6P97326 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh6P97326 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh6P97326 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh6P97326 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Gm12260-201ENSMUST00000122447 411 ntBASIC15.2■□□□□ 0.02
Cdh6P97326 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdh6P97326 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh6P97326 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh6P97326 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdh6P97326 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Gm5177-201ENSMUST00000183092 997 ntBASIC15.19■□□□□ 0.02
Cdh6P97326 Mir8117-201ENSMUST00000184773 107 ntBASIC15.19■□□□□ 0.02
Cdh6P97326 Gm43514-201ENSMUST00000198852 424 ntBASIC15.19■□□□□ 0.02
Cdh6P97326 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.19■□□□□ 0.02
Cdh6P97326 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cdh6P97326 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Cdh6P97326 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Cdh6P97326 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh6P97326 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh6P97326 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh6P97326 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms